BS-virus-finder: virus integration calling using bisulfite sequencing data | Zendy

Shengjie Gao | Zendy; Xuesong Hu | Zendy; Fengping Xu | Zendy; Changduo Gao | Zendy; Kai Xiong | Zendy; Xiao Zhao | Zendy; Haixiao Chen | Zendy; Shancen Zhao | Zendy; Mengyao Wang | Zendy; Dongke Fu | Zendy; Xiaohui Zhao | Zendy; Jie Bai | Zendy; Likai Mao | Zendy; Bo Li | Zendy; Song Wu | Zendy; Jian Wang | Zendy; Shengbin Li | Zendy; Huangming Yang | Zendy; Lars Bolund | Zendy; Christian N. S. Pedersen | Zendy

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BS-virus-finder: virus integration calling using bisulfite sequencing data

Author(s) -

Shengjie Gao,

Xuesong Hu,

Fengping Xu,

Changduo Gao,

Kai Xiong,

Xiao Zhao,

Haixiao Chen,

Shancen Zhao,

Mengyao Wang,

Dongke Fu,

Xiaohui Zhao,

Jie Bai,

Likai Mao,

Bo Li,

Song Wu,

Jian Wang,

Shengbin Li,

Huangming Yang,

Lars Bolund,

Christian N. S. Pedersen

Publication year - 2017

Publication title -

gigascience

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 2.947

H-Index - 54

ISSN - 2047-217X

DOI - 10.1093/gigascience/gix123

Subject(s) - bisulfite , dna methylation , bisulfite sequencing , biology , epigenetics , computational biology , genetics , genome , virus , illumina methylation assay , methylated dna immunoprecipitation , dna sequencing , methylation , dna , gene , gene expression

DNA methylation plays a key role in the regulation of gene expression and carcinogenesis. Bisulfite sequencing studies mainly focus on calling single nucleotide polymorphism, different methylation region, and find allele-specific DNA methylation. Until now, only a few software tools have focused on virus integration using bisulfite sequencing data.

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