Scalable analysis of multi-modal biomedical data
Author(s) -
Jaclyn Smith,
Yao Shi,
Michael Benedikt,
Miloš Nikolić
Publication year - 2021
Publication title -
gigascience
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.947
H-Index - 54
ISSN - 2047-217X
DOI - 10.1093/gigascience/giab058
Subject(s) - computer science , scalability , data science , data integration , data mining , big data , key (lock) , data processing , feature (linguistics) , scale (ratio) , modal , data type , machine learning , database , linguistics , philosophy , physics , chemistry , computer security , quantum mechanics , polymer chemistry , programming language
Targeted diagnosis and treatment options are dependent on insights drawn from multi-modal analysis of large-scale biomedical datasets. Advances in genomics sequencing, image processing, and medical data management have supported data collection and management within medical institutions. These efforts have produced large-scale datasets and have enabled integrative analyses that provide a more thorough look of the impact of a disease on the underlying system. The integration of large-scale biomedical data commonly involves several complex data transformation steps, such as combining datasets to build feature vectors for learning analysis. Thus, scalable data integration solutions play a key role in the future of targeted medicine. Though large-scale data processing frameworks have shown promising performance for many domains, they fail to support scalable processing of complex datatypes.
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