Open AccessCSA: A high-throughput chromosome-scale assembly pipeline for vertebrate genomes
Author(s) -
Heiner Kuhl,
Ling Li,
Sven Wuertz,
Matthias Stöck,
XuFang Liang,
Christophe Klopp
Publication year - 2020
Publication title -
gigascience
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 2.947
H-Index - 54
ISSN - 2047-217X
DOI - 10.1093/gigascience/giaa034
Subject(s) - contig , genome , sequence assembly , chromosome , genomics , computational biology , reference genome , computer science , biology , pipeline (software) , genetics , gene , gene expression , transcriptome , programming language
Easy-to-use and fast bioinformatics pipelines for long-read assembly that go beyond the contig level to generate highly continuous chromosome-scale genomes from raw data remain scarce.
Accelerating Research
Robert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom
Address
John Eccles HouseRobert Robinson Avenue,
Oxford Science Park, Oxford
OX4 4GP, United Kingdom