Characterization of Roseibacterium persicicum sp. nov., and emended description of the genus Roseibacterium
Author(s) -
Jaewoo Yoon
Publication year - 2020
Publication title -
fems microbiology letters
Language(s) - English
Resource type - Journals
eISSN - 1574-6968
pISSN - 0378-1097
DOI - 10.1093/femsle/fnaa101
Subject(s) - biology , 16s ribosomal rna , phylogenetic tree , strain (injury) , genus , microbiology and biotechnology , alphaproteobacteria , phosphatidylglycerol , bacteria , phylogenetics , genomic dna , whole genome sequencing , botany , gene , genome , genetics , anatomy , phospholipid , membrane , phosphatidylcholine
A novel alphaproteobacterium, designated as KMU-115T, was isolated from seawater collected on the coast of Chuam Beach, Republic of Korea, and subjected to a polyphasic characterization. The cells were pale apricot-colored, strictly aerobic, Gram-staining-negative, rod-shaped, non-motile and chemoorganoheterotrophic. The novel isolate grew at NaCl concentrations of 0–7%, pH 6.0–9.5 and 10–45°C. A phylogenetic analysis based on the 16S rRNA gene sequence revealed that strain KMU-115T belongs to the family ‘Rhodobacteraceae’, and that it had the greatest sequence similarity (96.8%) with ‘Roseibacterium beibuensis’ JLT1202rT. The major respiratory quinone system of the novel isolate was ubiquinone-10 (Q-10) and the main (>10%) cellular fatty acid was C18:1 ω7c. The assembled draft genome size of strain KMU-115T was 3.71 Mbp. The genomic DNA G + C content was 70.8 mol%. Strain KMU-115T had phosphatidylglycerol, four unidentified aminolipids, an unidentified aminophospholipid and seven unidentified lipids as polar lipids. From the distinct polyphasic taxonomic characteristics, the strain is considered to represent a novel species of the genus Roseibacterium for which the name Roseibacterium persicicum sp. nov. is proposed. The type strain of R. persicicum sp. nov. is KMU-115T (= KCCM 90339T = NBRC 114190T). An emended description of the genus Roseibacterium is also provided.
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