LymPHOS 2.0: an update of a phosphosite database of primary human T cells
Author(s) -
Tiến Dũng Nguyễn,
Oriol Vidal-Cortes,
Óscar Gallardo,
Joaquín Abián,
Montserrat Carrascal
Publication year - 2015
Publication title -
database
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 1.406
H-Index - 62
ISSN - 1758-0463
DOI - 10.1093/database/bav115
Subject(s) - database , phosphorylation , computer science , information retrieval , database search engine , biology , search engine , microbiology and biotechnology
LymPHOS is a web-oriented database containing peptide and protein sequences and spectrometric information on the phosphoproteome of primary human T-Lymphocytes. Current release 2.0 contains 15 566 phosphorylation sites from 8273 unique phosphopeptides and 4937 proteins, which correspond to a 45-fold increase over the original database description. It now includes quantitative data on phosphorylation changes after time-dependent treatment with activators of the TCR-mediated signal transduction pathway. Sequence data quality has also been improved with the use of multiple search engines for database searching. LymPHOS can be publicly accessed at http://www.lymphos.org. Database URL: http://www.lymphos.org.
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