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Bayesian inference of distributed time delay in transcriptional and translational regulation
Author(s) -
Boseung Choi,
YuYu Cheng,
Selahattin Çınar,
William Ott,
Matthew R. Bennett,
Krešimir Josić́,
Jae Kyoung Kim
Publication year - 2019
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btz574
Subject(s) - inference , computer science , bayesian probability , bayesian inference , statistical inference , computational biology , econometrics , artificial intelligence , biology , statistics , mathematics
Advances in experimental and imaging techniques have allowed for unprecedented insights into the dynamical processes within individual cells. However, many facets of intracellular dynamics remain hidden, or can be measured only indirectly. This makes it challenging to reconstruct the regulatory networks that govern the biochemical processes underlying various cell functions. Current estimation techniques for inferring reaction rates frequently rely on marginalization over unobserved processes and states. Even in simple systems this approach can be computationally challenging, and can lead to large uncertainties and lack of robustness in parameter estimates. Therefore we will require alternative approaches to efficiently uncover the interactions in complex biochemical networks.

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