CytoPacq: a web-interface for simulating multi-dimensional cell imaging | Zendy

David Wiesner | Zendy; David Svoboda | Zendy; Martin Maška | Zendy; Michal Kozubek | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

CytoPacq: a web-interface for simulating multi-dimensional cell imaging

Author(s) -

David Wiesner,

David Svoboda,

Martin Maška,

Michal Kozubek

Publication year - 2019

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btz417

Subject(s) - computer science , interface (matter) , graphical user interface , robustness (evolution) , modular design , benchmark (surveying) , user interface , web service , web application , data mining , information retrieval , human–computer interaction , world wide web , programming language , biochemistry , chemistry , geodesy , bubble , maximum bubble pressure method , parallel computing , gene , geography

Objective assessment of bioimage analysis methods is an essential step towards understanding their robustness and parameter sensitivity, calling for the availability of heterogeneous bioimage datasets accompanied by their reference annotations. Because manual annotations are known to be arduous, highly subjective and barely reproducible, numerous simulators have emerged over past decades, generating synthetic bioimage datasets complemented with inherent reference annotations. However, the installation and configuration of these tools generally constitutes a barrier to their widespread use.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research