Bayesian integrative model for multi-omics data with missingness
Author(s) -
Zhou Fang,
Tianzhou Ma,
Guping Tang,
Li Zhu,
Qi Yan,
Ting Wang,
Juan C. Celedón,
Wei Chen,
George C. Tseng
Publication year - 2018
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bty775
Subject(s) - missing data , computer science , bayesian probability , data mining , computational biology , machine learning , artificial intelligence , biology
Integrative analysis of multi-omics data from different high-throughput experimental platforms provides valuable insight into regulatory mechanisms associated with complex diseases, and gains statistical power to detect markers that are otherwise overlooked by single-platform omics analysis. In practice, a significant portion of samples may not be measured completely due to insufficient tissues or restricted budget (e.g. gene expression profile are measured but not methylation). Current multi-omics integrative methods require complete data. A common practice is to ignore samples with any missing platform and perform complete case analysis, which leads to substantial loss of statistical power.
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