Phylogenetic approaches to identifying fragments of the same gene, with application to the wheat genome | Zendy

Ivana Piližota | Zendy; Clément-Marie Train | Zendy; Adrian Altenhoff | Zendy; Henning Redestig | Zendy; Christophe Dessimoz | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

Phylogenetic approaches to identifying fragments of the same gene, with application to the wheat genome

Author(s) -

Ivana Piližota,

Clément-Marie Train,

Adrian Altenhoff,

Henning Redestig,

Christophe Dessimoz

Publication year - 2018

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bty772

Subject(s) - ensembl , genome , phylogenetic tree , sequence assembly , biology , gene , computational biology , gene prediction , reference genome , genomics , genetics , computer science , transcriptome , gene expression

As the time and cost of sequencing decrease, the number of available genomes and transcriptomes rapidly increases. Yet the quality of the assemblies and the gene annotations varies considerably and often remains poor, affecting downstream analyses. This is particularly true when fragments of the same gene are annotated as distinct genes, which may cause them to be mistaken as paralogs.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research