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Uncertainty quantification, propagation and characterization by Bayesian analysis combined with global sensitivity analysis applied to dynamical intracellular pathway models
Author(s) -
Olivia Eriksson,
Alexandra Jauhiainen,
Sara Maad Sasane,
Andrei Kramer,
Anu G. Nair,
Carolina Sartorius,
Jeanette Hellgren Kotaleski
Publication year - 2018
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bty607
Subject(s) - sensitivity (control systems) , bayesian probability , computer science , uncertainty quantification , characterization (materials science) , pathway analysis , biological system , econometrics , mathematics , chemistry , artificial intelligence , machine learning , biology , materials science , nanotechnology , engineering , biochemistry , electronic engineering , gene expression , gene
Dynamical models describing intracellular phenomena are increasing in size and complexity as more information is obtained from experiments. These models are often over-parameterized with respect to the quantitative data used for parameter estimation, resulting in uncertainty in the individual parameter estimates as well as in the predictions made from the model. Here we combine Bayesian analysis with global sensitivity analysis (GSA) in order to give better informed predictions; to point out weaker parts of the model that are important targets for further experiments, as well as to give guidance on parameters that are essential in distinguishing different qualitative output behaviours.

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