Spatial quantification of the synaptic activity phenotype across large populations of neurons with Markov random fields
Author(s) -
Sean M. Robinson,
Michael J. Courtney
Publication year - 2018
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bty322
Subject(s) - markov chain , phenotype , markov random field , computer science , neuroscience , artificial intelligence , pattern recognition (psychology) , biology , machine learning , genetics , segmentation , image segmentation , gene
The collective and co-ordinated synaptic activity of large neuronal populations is relevant to neuronal development as well as a range of neurological diseases. Quantification of synaptically-mediated neuronal signalling permits further downstream analysis as well as potential application in target validation and in vitro screening assays. Our aim is to develop a phenotypic quantification for neuronal activity imaging data of large populations of neurons, in particular relating to the spatial component of the activity.
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