NMRNet: a deep learning approach to automated peak picking of protein NMR spectra
Author(s) -
Piotr Klukowski,
Michał Augoff,
Maciej Zięba,
Maciej Drwal,
Adam Gonczarek,
Michał Walczak
Publication year - 2018
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bty134
Subject(s) - deep learning , computer science , nmr spectra database , spectral line , artificial intelligence , chemistry , physics , astronomy
Automated selection of signals in protein NMR spectra, known as peak picking, has been studied for over 20 years, nevertheless existing peak picking methods are still largely deficient. Accurate and precise automated peak picking would accelerate the structure calculation, and analysis of dynamics and interactions of macromolecules. Recent advancement in handling big data, together with an outburst of machine learning techniques, offer an opportunity to tackle the peak picking problem substantially faster than manual picking and on par with human accuracy. In particular, deep learning has proven to systematically achieve human-level performance in various recognition tasks, and thus emerges as an ideal tool to address automated identification of NMR signals.
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