GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC | Zendy

Ruidong Li | Zendy; Han Qu | Zendy; Shibo Wang | Zendy; Julong Wei | Zendy; Le Zhang | Zendy; Renyuan Ma | Zendy; Jianming Lü | Zendy; Jianguo Zhu | Zendy; Weide Zhong | Zendy; Zhenyu Jia | Zendy

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GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC

Author(s) -

Ruidong Li,

Han Qu,

Shibo Wang,

Julong Wei,

Le Zhang,

Renyuan Ma,

Jianming Lü,

Jianguo Zhu,

Weide Zhong,

Zhenyu Jia

Publication year - 2018

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bty124

Subject(s) - bioconductor , microrna , r package , computational biology , software package , computer science , messenger rna , biology , software , operating system , genetics , programming language , gene

The large-scale multidimensional omics data in the Genomic Data Commons (GDC) provides opportunities to investigate the crosstalk among different RNA species and their regulatory mechanisms in cancers. Easy-to-use bioinformatics pipelines are needed to facilitate such studies.

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