ASAR: visual analysis of metagenomes in R | Zendy

Askarbek Orakov | Zendy; Nazgul Sakenova | Zendy; Anatoly Sorokin | Zendy; Igor Goryanin | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

ASAR: visual analysis of metagenomes in R

Author(s) -

Askarbek Orakov,

Nazgul Sakenova,

Anatoly Sorokin,

Igor Goryanin

Publication year - 2017

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btx775

Subject(s) - metagenomics , computer science , visualization , annotation , hierarchy , source code , kegg , plug in , function (biology) , data mining , information retrieval , biology , artificial intelligence , programming language , biochemistry , gene expression , transcriptome , evolutionary biology , gene , economics , market economy

Functional and taxonomic analyses are critical steps in understanding interspecific interactions within microbial communities. Currently, such analyses are run separately, which complicates interpretation of results. Here we present the ASAR interactive tool for simultaneous analysis of metagenomic data in three dimensions: taxonomy, function, metagenome.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research