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Kfits: a software framework for fitting and cleaning outliers in kinetic measurements
Author(s) -
Oded Rimon,
Dana Reichmann
Publication year - 2017
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btx577
Subject(s) - python (programming language) , outlier , computer science , workflow , software , data mining , kinetic energy , noise (video) , biological system , database , artificial intelligence , programming language , physics , biology , quantum mechanics , image (mathematics)
Kinetic measurements have played an important role in elucidating biochemical and biophysical phenomena for over a century. While many tools for analysing kinetic measurements exist, most require low noise levels in the data, leaving outlier measurements to be cleaned manually. This is particularly true for protein misfolding and aggregation processes, which are extremely noisy and hence difficult to model. Understanding these processes is paramount, as they are associated with diverse physiological processes and disorders, most notably neurodegenerative diseases. Therefore, a better tool for analysing and cleaning protein aggregation traces is required.

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