Genome-scale fluxes predicted under the guidance of enzyme abundance using a novel hyper-cube shrink algorithm
Author(s) -
Zhengwei Xie,
Tianyu Zhang,
Qi Ouyang
Publication year - 2017
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btx574
Subject(s) - cube (algebra) , scale (ratio) , abundance (ecology) , algorithm , computer science , computational biology , mathematics , biology , combinatorics , cartography , ecology , geography
One of the long-expected goals of genome-scale metabolic modelling is to evaluate the influence of the perturbed enzymes on flux distribution. Both ordinary differential equation (ODE) models and constraint-based models, like Flux balance analysis (FBA), lack the capacity to perform metabolic control analysis (MCA) for large-scale networks.
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