Enabling reproducible real-time quantitative PCR research: the RDML package | Zendy

Stefan Rödiger | Zendy; Michał Burdukiewicz | Zendy; AndrejNikolai Spiess | Zendy; Konstantin А. Blagodatskikh | Zendy

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Enabling reproducible real-time quantitative PCR research: the RDML package

Author(s) -

Stefan Rödiger,

Michał Burdukiewicz,

AndrejNikolai Spiess,

Konstantin А. Blagodatskikh

Publication year - 2017

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btx528

Subject(s) - computer science , markup language , documentation , r package , data file , database , sample (material) , information retrieval , data mining , operating system , programming language , xml , chemistry , chromatography

Reproducibility, a cornerstone of research, requires defined data formats, which include the setup and output of experiments. The real-time PCR data markup language (RDML) is a recommended standard of the minimum information for publication of quantitative real-time PCR experiments guidelines. Despite the popularity of the RDML format for analysis of quantitative PCR data, handling of RDML files is not yet widely supported in all PCR curve analysis softwares.

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