CrocoBLAST: Running BLAST efficiently in the age of next-generation sequencing | Zendy

Ravi José Tristão Ramos | Zendy; Allan Cézar de Azevedo Martins | Zendy; Gabrielle da Silva Delgado | Zendy; Crina-Maria Ionescu | Zendy; Turán P. Ürményi | Zendy; Rosane Silva | Zendy; Jaroslav Koča | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

CrocoBLAST: Running BLAST efficiently in the age of next-generation sequencing

Author(s) -

Ravi José Tristão Ramos,

Allan Cézar de Azevedo Martins,

Gabrielle da Silva Delgado,

Crina-Maria Ionescu,

Turán P. Ürményi,

Rosane Silva,

Jaroslav Koča

Publication year - 2017

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btx465

Subject(s) - computer science , operating system , documentation , graphical user interface , java

CrocoBLAST is a tool for dramatically speeding up BLAST+ execution on any computer. Alignments that would take days or weeks with NCBI BLAST+ can be run overnight with CrocoBLAST. Additionally, CrocoBLAST provides features critical for NGS data analysis, including: results identical to those of BLAST+; compatibility with any BLAST+ version; real-time information regarding calculation progress and remaining run time; access to partial alignment results; queueing, pausing, and resuming BLAST+ calculations without information loss.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research