JDINAC: joint density-based non-parametric differential interaction network analysis and classification using high-dimensional sparse omics data
Author(s) -
Jiadong Ji,
Di He,
Yang Feng,
Yong He,
Fuzhong Xue,
Lei Xie
Publication year - 2017
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btx360
Subject(s) - computer science , parametric statistics , feature selection , data mining , interaction network , confounding , joint probability distribution , differential (mechanical device) , biological network , artificial intelligence , pattern recognition (psychology) , computational biology , mathematics , biology , statistics , gene , genetics , engineering , aerospace engineering
A complex disease is usually driven by a number of genes interwoven into networks, rather than a single gene product. Network comparison or differential network analysis has become an important means of revealing the underlying mechanism of pathogenesis and identifying clinical biomarkers for disease classification. Most studies, however, are limited to network correlations that mainly capture the linear relationship among genes, or rely on the assumption of a parametric probability distribution of gene measurements. They are restrictive in real application.
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