PhyD3: a phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization | Zendy

Łukasz Kreft | Zendy; Alexander Botzki | Zendy; Frederik Coppens | Zendy; Klaas Vandepoele | Zendy; Michiel Van Bel | Zendy

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PhyD3: a phylogenetic tree viewer with extended phyloXML support for functional genomics data visualization

Author(s) -

Łukasz Kreft,

Alexander Botzki,

Frederik Coppens,

Klaas Vandepoele,

Michiel Van Bel

Publication year - 2017

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btx324

Subject(s) - computer science , visualization , javascript , annotation , web application , tree (set theory) , world wide web , phylogenetic tree , open source , data science , data mining , software , biology , artificial intelligence , programming language , mathematical analysis , biochemistry , mathematics , gene

Comparative and evolutionary studies utilize phylogenetic trees to analyze and visualize biological data. Recently, several web-based tools for the display, manipulation and annotation of phylogenetic trees, such as iTOL and Evolview, have released updates to be compatible with the latest web technologies. While those web tools operate an open server access model with a multitude of registered users, a feature-rich open source solution using current web technologies is not available.

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