Open AccessMotifMap-RNA: a genome-wide map of RBP binding sites
Author(s) -
Yu Liu,
Sha Sun,
Timothy W. Bredy,
Marcelo A. Wood,
Robert C. Spitale,
Pierre Baldi
Publication year - 2017
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btx087
Subject(s) - rna , rna binding protein , computational biology , binding site , biology , genome , gene , genetics
RNA plays a critical role in gene expression and its regulation. RNA binding proteins (RBPs), in turn, are important regulators of RNA. Thanks to the availability of large scale data for RBP binding motifs and in vivo binding sites results in the form of eCLIP experiments, it is now possible to computationally predict RBP binding sites across the whole genome.
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