The PPI3D web server for searching, analyzing and modeling protein–protein interactions in the context of 3D structures | Zendy

Justas Dapkūnas | Zendy; Albertas Timinskas | Zendy; Kliment Olechnovič | Zendy; Mindaugas Margelevičius | Zendy; Rytis Dičiūnas | Zendy; Česlovas Venclovas | Zendy

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The PPI3D web server for searching, analyzing and modeling protein–protein interactions in the context of 3D structures

Author(s) -

Justas Dapkūnas,

Albertas Timinskas,

Kliment Olechnovič,

Mindaugas Margelevičius,

Rytis Dičiūnas,

Česlovas Venclovas

Publication year - 2016

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btw756

Subject(s) - computer science , web server , cluster analysis , software , voronoi diagram , redundancy (engineering) , context (archaeology) , data mining , data redundancy , the internet , database , world wide web , operating system , machine learning , biology , paleontology , geometry , mathematics

The PPI3D web server is focused on searching and analyzing the structural data on protein-protein interactions. Reducing the data redundancy by clustering and analyzing the properties of interaction interfaces using Voronoi tessellation makes this software a highly effective tool for addressing different questions related to protein interactions.

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