QUBIC: a bioconductor package for qualitative biclustering analysis of gene co-expression data
Author(s) -
Yu Zhang,
Juan Xie,
Jinyu Yang,
Anne Fennell,
Chi Zhang,
Qin Ma
Publication year - 2016
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btw635
Subject(s) - bioconductor , biclustering , r package , expression (computer science) , computer science , computational biology , gene expression , mega , data mining , gene , biology , cluster analysis , genetics , artificial intelligence , programming language , cure data clustering algorithm , correlation clustering , physics , astronomy
Biclustering is widely used to identify co-expressed genes under subsets of all the conditions in a large-scale transcriptomic dataset. The program, QUBIC, is recognized as one of the most efficient and effective biclustering methods for biological data interpretation. However, its availability is limited to a C implementation and to a low-throughput web interface.
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