MEMO: multi-experiment mixture model analysis of censored data
Author(s) -
EvaMaria Geissen,
Jan Hasenauer,
Stephanie Heinrich,
Silke Hauf,
Fabian J. Theis,
Nicole Radde
Publication year - 2016
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btw190
Subject(s) - computer science , censoring (clinical trials) , inference , statistical inference , data mining , data analysis , experimental data , relevance (law) , matlab , analytics , machine learning , artificial intelligence , statistics , mathematics , political science , law , operating system
The statistical analysis of single-cell data is a challenge in cell biological studies. Tailored statistical models and computational methods are required to resolve the subpopulation structure, i.e. to correctly identify and characterize subpopulations. These approaches also support the unraveling of sources of cell-to-cell variability. Finite mixture models have shown promise, but the available approaches are ill suited to the simultaneous consideration of data from multiple experimental conditions and to censored data. The prevalence and relevance of single-cell data and the lack of suitable computational analytics make automated methods, that are able to deal with the requirements posed by these data, necessary.
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