ParTIES: a toolbox for Paramecium interspersed DNA elimination studies | Zendy

Cyril Denby Wilkes | Zendy; Olivier Arnaiz | Zendy; Linda Sperling | Zendy

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ParTIES: a toolbox for Paramecium interspersed DNA elimination studies

Author(s) -

Cyril Denby Wilkes,

Olivier Arnaiz,

Linda Sperling

Publication year - 2015

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btv691

Subject(s) - perl , identification (biology) , biology , computational biology , multicellular organism , dna sequencing , paramecium , genetics , computer science , dna , evolutionary biology , programming language , gene , microbiology and biotechnology , ecology

Developmental DNA elimination occurs in a wide variety of multicellular organisms, but ciliates are the only single-celled eukaryotes in which this phenomenon has been reported. Despite considerable interest in ciliates as models for DNA elimination, no standard methods for identification and characterization of the eliminated sequences are currently available.

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