LocusExplorer: a user-friendly tool for integrated visualization of human genetic association data and biological annotations | Zendy

Tokhir Dadaev | Zendy; Daniel Leongamornlert | Zendy; Edward J. Saunders | Zendy; Rosalind A. Eeles | Zendy; Zsofia KoteJarai | Zendy

Open Access

LocusExplorer: a user-friendly tool for integrated visualization of human genetic association data and biological annotations

Author(s) -

Tokhir Dadaev,

Daniel Leongamornlert,

Edward J. Saunders,

Rosalind A. Eeles,

Zsofia KoteJarai

Publication year - 2015

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btv690

Subject(s) - computer science , personalization , visualization , zoom , source code , user interface , graphical user interface , open source , plot (graphics) , user friendly , data visualization , web application , code (set theory) , interface (matter) , software , world wide web , database , data mining , programming language , operating system , biology , statistics , mathematics , bubble , maximum bubble pressure method , lens (geology) , paleontology , set (abstract data type)

: In this article, we present LocusExplorer, a data visualization and exploration tool for genetic association data. LocusExplorer is written in R using the Shiny library, providing access to powerful R-based functions through a simple user interface. LocusExplorer allows users to simultaneously display genetic, statistical and biological data for humans in a single image and allows dynamic zooming and customization of the plot features. Publication quality plots may then be produced in a variety of file formats.

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