Fit3D: a web application for highly accurate screening of spatial residue patterns in protein structure data | Zendy

Florian Kaiser | Zendy; Alexander Eisold | Zendy; Sebastian Bittrich | Zendy; Dirk Labudde | Zendy

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Fit3D: a web application for highly accurate screening of spatial residue patterns in protein structure data

Author(s) -

Florian Kaiser,

Alexander Eisold,

Sebastian Bittrich,

Dirk Labudde

Publication year - 2015

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btv637

Subject(s) - computer science , web application , data mining , protein function , data structure , information retrieval , world wide web , computational biology , biology , programming language , genetics , gene

The clarification of linkage between protein structure and function is still a demanding process and can be supported by comparison of spatial residue patterns, so-called structural motifs. However, versatile up-to-date resources to search for local structure similarities are rare. We present Fit3D, an easily accessible web application for highly accurate screening of structural motifs in 3D protein data.

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