Open Accessagplus: a rapid and flexible tool for aggregation plots
Author(s) -
Kazumitsu Maehara,
Yasuyuki Ohkawa
Publication year - 2015
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btv322
Subject(s) - computer science , software , simple (philosophy) , line (geometry) , operating system , mathematics , philosophy , geometry , epistemology
Aggregation plots are frequently used to evaluate signal distributions at user-interested points in ChIP-Seq data analysis. agplus, a new and simple command-line tool, enables rapid and flexible generation of text tables tailored for aggregation plots from which users can easily design multiple groups based on user-definitions such as regulatory regions or transcription initiation sites.
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