PDBest: a user–friendly platform for manipulating and enhancing protein structures
Author(s) -
Wellisson R. S. Gonçalves,
Valdete Gonçalves-Almeida,
Aleksander L. Arruda,
Wagner Meira,
Carlos Henrique da Silveira,
Douglas E. V. Pires,
Raquel C. de Melo-Minardi
Publication year - 2015
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btv223
Subject(s) - computer science , graphical user interface , interface (matter) , user friendly , protein data bank (rcsb pdb) , download , application programming interface , operating system , human–computer interaction , physics , bubble , nuclear magnetic resonance , maximum bubble pressure method
PDBest (PDB Enhanced Structures Toolkit) is a user-friendly, freely available platform for acquiring, manipulating and normalizing protein structures in a high-throughput and seamless fashion. With an intuitive graphical interface it allows users with no programming background to download and manipulate their files. The platform also exports protocols, enabling users to easily share PDB searching and filtering criteria, enhancing analysis reproducibility.
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