Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli | Zendy

James Vlasblom | Zendy; Khalid Zuberi | Zendy; Harold Rodriguez | Zendy; Roland Arnold | Zendy; Alla Gagarinova | Zendy; Viktor Deineko | Zendy; Ashwani Kumar | Zendy; Elisa Leung | Zendy; Kamran Rizzolo | Zendy; Bahram Samanfar | Zendy; Luke J. Chang | Zendy; Sadhna Phanse | Zendy; Ashkan Golshani | Zendy; Jack Greenblatt | Zendy; Walid A. Houry | Zendy; Andrew Emili | Zendy; Quaid Morris | Zendy; Gary D. Bader | Zendy; Mohan Babu | Zendy

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Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli

Author(s) -

James Vlasblom,

Khalid Zuberi,

Harold Rodriguez,

Roland Arnold,

Alla Gagarinova,

Viktor Deineko,

Ashwani Kumar,

Elisa Leung,

Kamran Rizzolo,

Bahram Samanfar,

Luke J. Chang,

Sadhna Phanse,

Ashkan Golshani,

Jack Greenblatt,

Walid A. Houry,

Andrew Emili,

Quaid Morris,

Gary D. Bader,

Mohan Babu

Publication year - 2014

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btu671

Subject(s) - function (biology) , computational biology , biology , computer science , escherichia coli , biogenesis , resource (disambiguation) , protein function , gene , genetics , computer network

The model bacterium Escherichia coli is among the best studied prokaryotes, yet nearly half of its proteins are still of unknown biological function. This is despite a wealth of available large-scale physical and genetic interaction data. To address this, we extended the GeneMANIA function prediction web application developed for model eukaryotes to support E.coli.

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