ExpTreeDB: Web-based query and visualization of manually annotated gene expression profiling experiments of human and mouse from GEO | Zendy

Ming Ni | Zendy; Fuqiang Ye | Zendy; Juanjuan Zhu | Zendy; Zongwei Li | Zendy; Shuai Yang | Zendy; Bite Yang | Zendy; Lu Han | Zendy; Yongge Wu | Zendy; Ying Chen | Zendy; Fei Li | Zendy; Shengqi Wang | Zendy; Xiaochen Bo | Zendy

Open Access

ExpTreeDB: Web-based query and visualization of manually annotated gene expression profiling experiments of human and mouse from GEO

Author(s) -

Ming Ni,

Fuqiang Ye,

Juanjuan Zhu,

Zongwei Li,

Shuai Yang,

Bite Yang,

Lu Han,

Yongge Wu,

Ying Chen,

Fei Li,

Shengqi Wang,

Xiaochen Bo

Publication year - 2014

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btu560

Subject(s) - annotation , computer science , perl , web application , profiling (computer programming) , microarray databases , visualization , gene nomenclature , information retrieval , database , world wide web , gene expression profiling , data mining , gene , gene expression , biology , artificial intelligence , taxonomy (biology) , biochemistry , botany , nomenclature , operating system

Numerous public microarray datasets are valuable resources for the scientific communities. Several online tools have made great steps to use these data by querying related datasets with users' own gene signatures or expression profiles. However, dataset annotation and result exhibition still need to be improved.

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