WebProtégé: a collaborative Web-based platform for editing biomedical ontologies | Zendy

Matthew Horridge | Zendy; Tania Tudorache | Zendy; Csongor Nuylas | Zendy; Jennifer Vendetti | Zendy; Natalya F. Noy | Zendy; Mark A. Musen | Zendy

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WebProtégé: a collaborative Web-based platform for editing biomedical ontologies

Author(s) -

Matthew Horridge,

Tania Tudorache,

Csongor Nuylas,

Jennifer Vendetti,

Natalya F. Noy,

Mark A. Musen

Publication year - 2014

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btu256

Subject(s) - computer science , world wide web , javascript , documentation , java , metadata , web page , web application , interface (matter) , user interface , open biomedical ontologies , web api , web development , web standards , owl s , programming language , operating system , bubble , maximum bubble pressure method

WebProtégé is an open-source Web application for editing OWL 2 ontologies. It contains several features to aid collaboration, including support for the discussion of issues, change notification and revision-based change tracking. WebProtégé also features a simple user interface, which is geared towards editing the kinds of class descriptions and annotations that are prevalent throughout biomedical ontologies. Moreover, it is possible to configure the user interface using views that are optimized for editing Open Biomedical Ontology (OBO) class descriptions and metadata. Some of these views are shown in the Supplementary Material and can be seen in WebProtégé itself by configuring the project as an OBO project.

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