PARS: a web server for the prediction of Protein Allosteric and Regulatory Sites
Author(s) -
Alejandro Panjkovich,
Xavier Daura
Publication year - 2014
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btu002
Subject(s) - allosteric regulation , context (archaeology) , web server , function (biology) , computational biology , mechanism (biology) , biology , computer science , world wide web , microbiology and biotechnology , biochemistry , the internet , receptor , paleontology , philosophy , epistemology
The regulation of protein activity is a key aspect of life at the molecular level. Unveiling its details is thus crucial to understanding signalling and metabolic pathways. The most common and powerful mechanism of protein-function regulation is allostery, which has been increasingly calling the attention of medicinal chemists due to its potential for the discovery of novel therapeutics. In this context, PARS is a simple and fast method that queries protein dynamics and structural conservation to identify pockets on a protein structure that may exert a regulatory effect on the binding of a small-molecule ligand.
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