OntoQuery: easy-to-use web-based OWL querying | Zendy

Ilinca Tudose | Zendy; Janna Hastings | Zendy; Venkatesh Muthukrishnan | Zendy; Gareth Owen | Zendy; Steve Turner | Zendy; Adriano Dekker | Zendy; Namrata Kale | Zendy; Marcus Ennis | Zendy; Christoph Steinbeck | Zendy

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OntoQuery: easy-to-use web-based OWL querying

Author(s) -

Ilinca Tudose,

Janna Hastings,

Venkatesh Muthukrishnan,

Gareth Owen,

Steve Turner,

Adriano Dekker,

Namrata Kale,

Marcus Ennis,

Christoph Steinbeck

Publication year - 2013

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btt514

Subject(s) - computer science , owl s , world wide web , web application , information retrieval , the internet , web standards

The Web Ontology Language (OWL) provides a sophisticated language for building complex domain ontologies and is widely used in bio-ontologies such as the Gene Ontology. The Protégé-OWL ontology editing tool provides a query facility that allows composition and execution of queries with the human-readable Manchester OWL syntax, with syntax checking and entity label lookup. No equivalent query facility such as the Protégé Description Logics (DL) query yet exists in web form. However, many users interact with bio-ontologies such as chemical entities of biological interest and the Gene Ontology using their online Web sites, within which DL-based querying functionality is not available. To address this gap, we introduce the OntoQuery web-based query utility.

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