RDAVIDWebService: a versatile R interface to DAVID | Zendy

Cristóbal Fresno | Zendy; Elmer Fernández | Zendy

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RDAVIDWebService: a versatile R interface to DAVID

Author(s) -

Cristóbal Fresno,

Elmer Fernández

Publication year - 2013

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btt487

Subject(s) - bioconductor , annotation , scripting language , visualization , computer science , world wide web , interface (matter) , web site , license , mit license , user interface , information retrieval , software , programming language , the internet , data mining , biology , gene , artificial intelligence , genetics , operating system , bubble , maximum bubble pressure method

The RDAVIDWebService package provides a class-based interface from R programs/scripts to fully access/control the database for annotation, visualization and integrated discovery, without the need for human interaction on its Web site (http://david.abcc.ncifcrf.gov). The library enhances the database for annotation, visualization and integrated discovery capabilities for Gene Ontology analysis by means of GOstats-based direct acyclic graph conversion methods, in addition to the usual many-genes-to-many-terms visualization.

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