A distance-based test of association between paired heterogeneous genomic data
Author(s) -
Christopher Minas,
Edward Curry,
Giovanni Montana
Publication year - 2013
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btt450
Subject(s) - permutation (music) , sample size determination , statistical hypothesis testing , computer science , biological data , statistics , sample (material) , data mining , mathematics , biology , bioinformatics , physics , chemistry , chromatography , acoustics
Due to rapid technological advances, a wide range of different measurements can be obtained from a given biological sample including single nucleotide polymorphisms, copy number variation, gene expression levels, DNA methylation and proteomic profiles. Each of these distinct measurements provides the means to characterize a certain aspect of biological diversity, and a fundamental problem of broad interest concerns the discovery of shared patterns of variation across different data types. Such data types are heterogeneous in the sense that they represent measurements taken at different scales or represented by different data structures.
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