Pathway Processor 2.0: a web resource for pathway-based analysis of high-throughput data | Zendy

Luca Beltrame | Zendy; Luca Bianco | Zendy; Paolo Fontana | Zendy; Duccio Cavalieri | Zendy

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Pathway Processor 2.0: a web resource for pathway-based analysis of high-throughput data

Author(s) -

Luca Beltrame,

Luca Bianco,

Paolo Fontana,

Duccio Cavalieri

Publication year - 2013

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btt292

Subject(s) - computer science , throughput , identification (biology) , web service , resource (disambiguation) , data mining , world wide web , operating system , biology , computer network , botany , wireless

Pathway Processor 2.0 is a web application designed to analyze high-throughput datasets, including but not limited to microarray and next-generation sequencing, using a pathway centric logic. In addition to well-established methods such as the Fisher's test and impact analysis, Pathway Processor 2.0 offers innovative methods that convert gene expression into pathway expression, leading to the identification of differentially regulated pathways in a dataset of choice.

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