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MSMExplorer: visualizing Markov state models for biomolecule folding simulations
Author(s) -
Bryce Cronkite-Ratcliff,
Vijay S. Pande
Publication year - 2013
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btt051
Subject(s) - markov chain , folding (dsp implementation) , computer science , biomolecule , state (computer science) , markov model , statistical physics , theoretical computer science , computational biology , algorithm , nanotechnology , machine learning , biology , physics , engineering , materials science , electrical engineering
Markov state models (MSMs) for the study of biomolecule folding simulations have emerged as a powerful tool for computational study of folding dynamics. MSMExplorer is a visualization application purpose-built to visualize these MSMs with an aim to increase the efficacy and reach of MSM science.

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