Bioclipse-R: integrating management and visualization of life science data with statistical analysis | Zendy

Ola Spjuth | Zendy; Valentin Georgiev | Zendy; Lars Carlsson | Zendy; Jonathan Alvarsson | Zendy; Arvid Berg | Zendy; Egon Willighagen | Zendy; Jarl E. S. Wikberg | Zendy; Martin Eklund | Zendy

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Bioclipse-R: integrating management and visualization of life science data with statistical analysis

Author(s) -

Ola Spjuth,

Valentin Georgiev,

Lars Carlsson,

Jonathan Alvarsson,

Arvid Berg,

Egon Willighagen,

Jarl E. S. Wikberg,

Martin Eklund

Publication year - 2012

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bts681

Subject(s) - workbench , computer science , java , visualization , software , source code , set (abstract data type) , software engineering , programming language , plug in , data mining , data science

Bioclipse, a graphical workbench for the life sciences, provides functionality for managing and visualizing life science data. We introduce Bioclipse-R, which integrates Bioclipse and the statistical programming language R. The synergy between Bioclipse and R is demonstrated by the construction of a decision support system for anticancer drug screening and mutagenicity prediction, which shows how Bioclipse-R can be used to perform complex tasks from within a single software system.

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