RSeQC: quality control of RNA-seq experiments
Author(s) -
Liguo Wang,
Shengqin Wang,
Wei Li
Publication year - 2012
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bts356
Subject(s) - python (programming language) , computer science , scripting language , rna seq , rna , source code , computational biology , data mining , software , transcriptome , biology , programming language , gene , genetics , gene expression
RNA-seq has been extensively used for transcriptome study. Quality control (QC) is critical to ensure that RNA-seq data are of high quality and suitable for subsequent analyses. However, QC is a time-consuming and complex task, due to the massive size and versatile nature of RNA-seq data. Therefore, a convenient and comprehensive QC tool to assess RNA-seq quality is sorely needed.
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