pIRS: Profile-based Illumina pair-end reads simulator | Zendy

Xuesong Hu | Zendy; Jianying Yuan | Zendy; Yujian Shi | Zendy; Jianliang Lu | Zendy; Binghang Liu | Zendy; Zhenyu Li | Zendy; Yanxiang Chen | Zendy; Desheng Mu | Zendy; Hao Zhang | Zendy; Nan Li | Zendy; Zhen Yue | Zendy; Fan Bai | Zendy; Heng Li | Zendy; Wei Fan | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

pIRS: Profile-based Illumina pair-end reads simulator

Author(s) -

Xuesong Hu,

Jianying Yuan,

Yujian Shi,

Jianliang Lu,

Binghang Liu,

Zhenyu Li,

Yanxiang Chen,

Desheng Mu,

Hao Zhang,

Nan Li,

Zhen Yue,

Fan Bai,

Heng Li,

Wei Fan

Publication year - 2012

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/bts187

Subject(s) - perl , computer science , software , file transfer protocol , sequence assembly , illumina dye sequencing , data mining , reference genome , dna sequencing , computational biology , biology , the internet , genetics , world wide web , operating system , gene , gene expression , transcriptome

The next-generation high-throughput sequencing technologies, especially from Illumina, have been widely used in re-sequencing and de novo assembly studies. However, there is no existing software that can simulate Illumina reads with real error and quality distributions and coverage bias yet, which is very useful in relevant software development and study designing of sequencing projects.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research