Open AccessSiteComp: a server for ligand binding site analysis in protein structures
Author(s) -
Yingjie Lin,
Seungyeul Yoo,
Roberto Sánchez
Publication year - 2012
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/bts095
Subject(s) - binding site , ligand (biochemistry) , computational biology , computer science , plasma protein binding , chemistry , biology , biochemistry , receptor
Computational characterization of ligand-binding sites in proteins provides preliminary information for functional annotation, protein design and ligand optimization. SiteComp implements binding site analysis for comparison of binding sites, evaluation of residue contribution to binding sites and identification of sub-sites with distinct molecular interaction properties.
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