AMPA: an automated web server for prediction of protein antimicrobial regions | Zendy

Marc Torrent | Zendy; Paolo Di Tommaso | Zendy; David Pulido | Zendy; M. Victòria Nogués | Zendy; Cédric Notredame | Zendy; Ester Boix | Zendy; David Andreu | Zendy

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AMPA: an automated web server for prediction of protein antimicrobial regions

Author(s) -

Marc Torrent,

Paolo Di Tommaso,

David Pulido,

M. Victòria Nogués,

Cédric Notredame,

Ester Boix,

David Andreu

Publication year - 2011

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btr604

Subject(s) - web server , computer science , antimicrobial , world wide web , artificial intelligence , computational biology , the internet , biology , microbiology and biotechnology

AMPA is a web application for assessing the antimicrobial domains of proteins, with a focus on the design on new antimicrobial drugs. The application provides fast discovery of antimicrobial patterns in proteins that can be used to develop new peptide-based drugs against pathogens. Results are shown in a user-friendly graphical interface and can be downloaded as raw data for later examination.

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