CalcTav—integration of a spreadsheet and Taverna workbench | Zendy

Jacek Sroka | Zendy; Łukasz Krupa | Zendy; Andrzej Kierzek | Zendy; Jerzy Tyszkiewicz | Zendy

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CalcTav—integration of a spreadsheet and Taverna workbench

Author(s) -

Jacek Sroka,

Łukasz Krupa,

Andrzej Kierzek,

Jerzy Tyszkiewicz

Publication year - 2011

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btr425

Subject(s) - workflow , computer science , workbench , scripting language , world wide web , plug in , visualization , user interface , software engineering , python (programming language) , interface (matter) , graphical user interface , programming language , database , operating system , data mining , bubble , maximum bubble pressure method

Taverna workbench is an environment for construction, visualization and execution of bioinformatic workflows that integrates specialized tools available on the Internet. It already supports major bioinformatics services and is constantly gaining popularity. However, its user interface requires considerable effort to learn, and sometimes requires programming or scripting experience from its users. We have integrated Taverna with OpenOffice Calc, making the functions of the scientific workflow system available in the spreadsheet. In CalcTav, one can define workflows using the spreadsheet interface and analyze the results using the spreadsheet toolset.

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