ModeRNA server: an online tool for modeling RNA 3D structures | Zendy

Magdalena B. Rother | Zendy; Kaja Milanowska | Zendy; Tomasz Puton | Zendy; Jaroslaw Jeleniewicz | Zendy; Kristian Rother | Zendy; Janusz M. Bujnicki | Zendy

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ModeRNA server: an online tool for modeling RNA 3D structures

Author(s) -

Magdalena B. Rother,

Kaja Milanowska,

Tomasz Puton,

Jaroslaw Jeleniewicz,

Kristian Rother,

Janusz M. Bujnicki

Publication year - 2011

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btr400

Subject(s) - computer science , disk formatting , python (programming language) , rna , web server , software , template , rna ligase , nucleic acid structure , world wide web , information retrieval , programming language , the internet , operating system , biology , biochemistry , gene

The diverse functional roles of non-coding RNA molecules are determined by their underlying structure. ModeRNA server is an online tool for RNA 3D structure modeling by the comparative approach, based on a template RNA structure and a user-defined target-template sequence alignment. It offers an option to search for potential templates, given the target sequence. The server also provides tools for analyzing, editing and formatting of RNA structure files. It facilitates the use of the ModeRNA software and offers new options in comparison to the standalone program.

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