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MetATT: a web-based metabolomics tool for analyzing time-series and two-factor datasets
Author(s) -
Jianguo Xia,
Igor Sinelnikov,
David S. Wishart
Publication year - 2011
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btr392
Subject(s) - principal component analysis , computer science , metabolomics , visualization , data mining , multivariate statistics , time series , session (web analytics) , identification (biology) , series (stratigraphy) , bioinformatics , machine learning , artificial intelligence , biology , paleontology , botany , world wide web
Time-series and multifactor studies have become increasingly common in metabolomic studies. Common tasks for analyzing data from these relatively complex experiments include identification of major variations associated with each experimental factor, comparison of temporal profiles across different biological conditions, as well as detection and validation of the presence of interactions. Here we introduce MetATT, a web-based tool for time-series and two-factor metabolomic data analysis. MetATT offers a number of complementary approaches including 3D interactive principal component analysis, two-way heatmap visualization, two-way ANOVA, ANOVA-simultaneous component analysis and multivariate empirical Bayes time-series analysis. These procedures are presented through an intuitive web interface. At the end of each session, a detailed analysis report is generated to facilitate understanding of the results.

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