Sensitive and fast mapping of di-base encoded reads | Zendy

Farhad Hormozdiari | Zendy; Faraz Hach | Zendy; S. Cenk Ṣahinalp | Zendy; Evan E. Eichler | Zendy; Can Alkan | Zendy

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Sensitive and fast mapping of di-base encoded reads

Author(s) -

Farhad Hormozdiari,

Faraz Hach,

S. Cenk Ṣahinalp,

Evan E. Eichler,

Can Alkan

Publication year - 2011

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btr303

Subject(s) - computer science , sequence (biology) , genome , software , source code , code (set theory) , computational biology , biology , genetics , gene , set (abstract data type) , programming language , operating system

Discovering variation among high-throughput sequenced genomes relies on efficient and effective mapping of sequence reads. The speed, sensitivity and accuracy of read mapping are crucial to determining the full spectrum of single nucleotide variants (SNVs) as well as structural variants (SVs) in the donor genomes analyzed.

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