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A multiple network learning approach to capture system-wide condition-specific responses
Author(s) -
Sushmita Roy,
Margaret WernerWashburne,
Terran Lane
Publication year - 2011
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btr270
Subject(s) - computer science , exploit , process (computing) , machine learning , artificial intelligence , population , source code , biological network , data mining , bioinformatics , biology , demography , computer security , sociology , operating system
Condition-specific networks capture system-wide behavior under varying conditions such as environmental stresses, cell types or tissues. These networks frequently comprise parts that are unique to each condition, and parts that are shared among related conditions. Existing approaches for learning condition-specific networks typically identify either only differences or only similarities across conditions. Most of these approaches first learn networks per condition independently, and then identify similarities and differences in a post-learning step. Such approaches do not exploit the shared information across conditions during network learning.

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