AStream: an R package for annotating LC/MS metabolomic data
Author(s) -
Arnald Alonso,
Antonio Julià,
Antoni Beltran,
María Vinaixa,
Marta Díaz,
Lourdes Ibáñez,
Xavier Correig,
Sara Marsal
Publication year - 2011
Publication title -
bioinformatics
Language(s) - English
Resource type - Journals
SCImago Journal Rank - 3.599
H-Index - 390
eISSN - 1367-4811
pISSN - 1367-4803
DOI - 10.1093/bioinformatics/btr138
Subject(s) - metabolomics , r package , computer science , computational biology , chromatography , chemistry , biology , programming language
AStream, an R-statistical software package for the curation and identification of feature peaks extracted from liquid chromatography mass spectrometry (LC/MS) metabolomics data, is described. AStream detects isotopic, fragment and adduct patterns by identifying feature pairs that fulfill expected relational patterns. Data reduction by AStream allows compounds to be identified reliably and subsequently linked to metabolite databases. AStream provides researchers with a fast, reliable tool for summarizing metabolomic data, notably reducing curation time and increasing consistency of results.
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