R453Plus1Toolbox: an R/Bioconductor package for analyzing Roche 454 Sequencing data | Zendy

HansUlrich Klein | Zendy; Christoph Bartenhagen | Zendy; Alexander Kohlmann | Zendy; Vera Grossmann | Zendy; Christian Rückert | Zendy; Torsten Haferlach | Zendy; Martin Dugas | Zendy

AI Assistant Blog Pricing

Home ZAIA Blog

Open Access

R453Plus1Toolbox: an R/Bioconductor package for analyzing Roche 454 Sequencing data

Author(s) -

HansUlrich Klein,

Christoph Bartenhagen,

Alexander Kohlmann,

Vera Grossmann,

Christian Rückert,

Torsten Haferlach,

Martin Dugas

Publication year - 2011

Publication title -

bioinformatics

Language(s) - English

Resource type - Journals

SCImago Journal Rank - 3.599

H-Index - 390

eISSN - 1367-4811

pISSN - 1367-4803

DOI - 10.1093/bioinformatics/btr102

Subject(s) - bioconductor , computer science , r package , software , workflow , pipeline (software) , annotation , software package , data mining , computational biology , database , biology , programming language , genetics , artificial intelligence , gene

The R453Plus1Toolbox is an R/Bioconductor package for the analysis of 454 Sequencing data. Projects generated with Roche's data analysis software can be imported into R allowing advanced and customized analyses within the R/Bioconductor environment for sequencing data. Several methods were implemented extending the current functionality of Roche's software. These extensions include methods for quality assurance and annotation of detected variants. Further, a pipeline for the detection of structural variants, e.g. balanced chromosomal translocations, is provided.

The content you want is available to Zendy users.

Already have an account? Click here to sign in.

Having issues? You can contact us here

Accelerating Research